Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf139Q7TMV1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rnf139Q7TMV1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf139Q7TMV1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.09■□□□□ 0.81
Rnf139Q7TMV1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf139Q7TMV1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf139Q7TMV1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf139Q7TMV1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf139Q7TMV1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf139Q7TMV1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf139Q7TMV1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Rnf139Q7TMV1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf139Q7TMV1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf139Q7TMV1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rnf139Q7TMV1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf139Q7TMV1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.08■□□□□ 0.81
Rnf139Q7TMV1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.08■□□□□ 0.81
Rnf139Q7TMV1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf139Q7TMV1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
Rnf139Q7TMV1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf139Q7TMV1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf139Q7TMV1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf139Q7TMV1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf139Q7TMV1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf139Q7TMV1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf139Q7TMV1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf139Q7TMV1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf139Q7TMV1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf139Q7TMV1 Gm27405-201ENSMUST00000184201 112 ntBASIC20.07■□□□□ 0.8
Rnf139Q7TMV1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rnf139Q7TMV1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf139Q7TMV1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf139Q7TMV1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf139Q7TMV1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Golph3-205ENSMUST00000228671 2842 ntBASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf139Q7TMV1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf139Q7TMV1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf139Q7TMV1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf139Q7TMV1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf139Q7TMV1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.02■□□□□ 0.8
Rnf139Q7TMV1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rnf139Q7TMV1 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.02■□□□□ 0.8
Rnf139Q7TMV1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf139Q7TMV1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms