Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Gm2559-201ENSMUST00000201323 363 ntBASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox11Q7M6Y2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Dio3-201ENSMUST00000097228 1449 ntBASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sox11Q7M6Y2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox11Q7M6Y2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sox11Q7M6Y2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox11Q7M6Y2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.94■□□□□ 0.62
Sox11Q7M6Y2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox11Q7M6Y2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox11Q7M6Y2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.93■□□□□ 0.62
Sox11Q7M6Y2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox11Q7M6Y2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox11Q7M6Y2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox11Q7M6Y2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sox11Q7M6Y2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.93■□□□□ 0.62
Sox11Q7M6Y2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sox11Q7M6Y2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sox11Q7M6Y2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox11Q7M6Y2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox11Q7M6Y2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox11Q7M6Y2 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.92■□□□□ 0.62
Sox11Q7M6Y2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sox11Q7M6Y2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox11Q7M6Y2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox11Q7M6Y2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox11Q7M6Y2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox11Q7M6Y2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox11Q7M6Y2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox11Q7M6Y2 Gm715-201ENSMUST00000117865 831 ntBASIC18.91■□□□□ 0.62
Sox11Q7M6Y2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox11Q7M6Y2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Sox11Q7M6Y2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.91■□□□□ 0.62
Sox11Q7M6Y2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox11Q7M6Y2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox11Q7M6Y2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox11Q7M6Y2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sox11Q7M6Y2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sox11Q7M6Y2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms