Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nup98Q6PFD9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nup98Q6PFD9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nup98Q6PFD9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Nup98Q6PFD9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Nup98Q6PFD9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Nup98Q6PFD9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nup98Q6PFD9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Nup98Q6PFD9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Nup98Q6PFD9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nup98Q6PFD9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
Nup98Q6PFD9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Nup98Q6PFD9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Gm22325-201ENSMUST00000158904 308 ntBASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.34■■□□□ 1.17
Nup98Q6PFD9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC22.34■■□□□ 1.17
Nup98Q6PFD9 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nup98Q6PFD9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Nup98Q6PFD9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Nup98Q6PFD9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Nup98Q6PFD9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Nup98Q6PFD9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Nup98Q6PFD9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
Nup98Q6PFD9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Nup98Q6PFD9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Nup98Q6PFD9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.32■■□□□ 1.16
Nup98Q6PFD9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Nup98Q6PFD9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nup98Q6PFD9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Nup98Q6PFD9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Nup98Q6PFD9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nup98Q6PFD9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nup98Q6PFD9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.32■■□□□ 1.16
Nup98Q6PFD9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nup98Q6PFD9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nup98Q6PFD9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.31■■□□□ 1.16
Nup98Q6PFD9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC22.31■■□□□ 1.16
Nup98Q6PFD9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Nup98Q6PFD9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nup98Q6PFD9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nup98Q6PFD9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Nup98Q6PFD9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nup98Q6PFD9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Nup98Q6PFD9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nup98Q6PFD9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nup98Q6PFD9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.3■■□□□ 1.16
Nup98Q6PFD9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Nup98Q6PFD9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Nup98Q6PFD9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Nup98Q6PFD9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nup98Q6PFD9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Nup98Q6PFD9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC22.29■■□□□ 1.16
Nup98Q6PFD9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.29■■□□□ 1.16
Nup98Q6PFD9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nup98Q6PFD9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC22.29■■□□□ 1.16
Nup98Q6PFD9 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.29■■□□□ 1.16
Nup98Q6PFD9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nup98Q6PFD9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nup98Q6PFD9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nup98Q6PFD9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.28■■□□□ 1.16
Nup98Q6PFD9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nup98Q6PFD9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nup98Q6PFD9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Nup98Q6PFD9 Gm715-201ENSMUST00000117865 831 ntBASIC22.28■■□□□ 1.16
Nup98Q6PFD9 Mir7071-201ENSMUST00000184847 69 ntBASIC22.28■■□□□ 1.16
Nup98Q6PFD9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nup98Q6PFD9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nup98Q6PFD9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nup98Q6PFD9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Nup98Q6PFD9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.28■■□□□ 1.16
Nup98Q6PFD9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nup98Q6PFD9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC22.27■■□□□ 1.16
Nup98Q6PFD9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nup98Q6PFD9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.27■■□□□ 1.16
Nup98Q6PFD9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nup98Q6PFD9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nup98Q6PFD9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.27■■□□□ 1.16
Nup98Q6PFD9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Nup98Q6PFD9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nup98Q6PFD9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nup98Q6PFD9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nup98Q6PFD9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
Nup98Q6PFD9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC22.27■■□□□ 1.15
Nup98Q6PFD9 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.26■■□□□ 1.15
Nup98Q6PFD9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nup98Q6PFD9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.26■■□□□ 1.15
Nup98Q6PFD9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nup98Q6PFD9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nup98Q6PFD9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC22.26■■□□□ 1.15
Nup98Q6PFD9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nup98Q6PFD9 Zfp783-201ENSMUST00000095946 670 ntBASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms