Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg2Q6NS82 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.1■□□□□ 0.81
Retreg2Q6NS82 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg2Q6NS82 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg2Q6NS82 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Retreg2Q6NS82 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg2Q6NS82 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Retreg2Q6NS82 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg2Q6NS82 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg2Q6NS82 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg2Q6NS82 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.08■□□□□ 0.81
Retreg2Q6NS82 Gm27011-201ENSMUST00000182352 972 ntBASIC20.08■□□□□ 0.81
Retreg2Q6NS82 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg2Q6NS82 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retreg2Q6NS82 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retreg2Q6NS82 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retreg2Q6NS82 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retreg2Q6NS82 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Retreg2Q6NS82 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Gm7514-201ENSMUST00000209475 934 ntBASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Retreg2Q6NS82 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.06■□□□□ 0.8
Retreg2Q6NS82 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg2Q6NS82 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg2Q6NS82 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg2Q6NS82 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg2Q6NS82 Gm10602-201ENSMUST00000098239 609 ntBASIC20.06■□□□□ 0.8
Retreg2Q6NS82 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg2Q6NS82 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg2Q6NS82 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Retreg2Q6NS82 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg2Q6NS82 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Retreg2Q6NS82 BC021767-201ENSMUST00000126387 1716 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms