Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Six2Q62232 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.06■□□□□ 0.8
Six2Q62232 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six2Q62232 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six2Q62232 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six2Q62232 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six2Q62232 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.05■□□□□ 0.8
Six2Q62232 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six2Q62232 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six2Q62232 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six2Q62232 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.05■□□□□ 0.8
Six2Q62232 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six2Q62232 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Six2Q62232 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Six2Q62232 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six2Q62232 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six2Q62232 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Six2Q62232 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Six2Q62232 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six2Q62232 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Six2Q62232 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.04■□□□□ 0.8
Six2Q62232 Gm13534-201ENSMUST00000121169 513 ntBASIC20.04■□□□□ 0.8
Six2Q62232 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.04■□□□□ 0.8
Six2Q62232 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Six2Q62232 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six2Q62232 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Six2Q62232 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.04■□□□□ 0.8
Six2Q62232 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six2Q62232 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six2Q62232 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Six2Q62232 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Six2Q62232 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.03■□□□□ 0.8
Six2Q62232 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Six2Q62232 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Six2Q62232 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Six2Q62232 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.03■□□□□ 0.8
Six2Q62232 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.03■□□□□ 0.8
Six2Q62232 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.03■□□□□ 0.8
Six2Q62232 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six2Q62232 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six2Q62232 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six2Q62232 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.03■□□□□ 0.8
Six2Q62232 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six2Q62232 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six2Q62232 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.03■□□□□ 0.8
Six2Q62232 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six2Q62232 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six2Q62232 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six2Q62232 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Six2Q62232 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Six2Q62232 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six2Q62232 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six2Q62232 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Six2Q62232 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six2Q62232 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six2Q62232 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six2Q62232 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Six2Q62232 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Six2Q62232 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Six2Q62232 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.79
Six2Q62232 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.01■□□□□ 0.79
Six2Q62232 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Six2Q62232 Gm13234-201ENSMUST00000120010 747 ntBASIC20.01■□□□□ 0.79
Six2Q62232 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Six2Q62232 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Six2Q62232 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Six2Q62232 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Six2Q62232 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Six2Q62232 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Six2Q62232 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Six2Q62232 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20■□□□□ 0.79
Six2Q62232 Gm19094-201ENSMUST00000209791 1246 ntBASIC20■□□□□ 0.79
Six2Q62232 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Six2Q62232 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Six2Q62232 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Six2Q62232 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Six2Q62232 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Six2Q62232 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20■□□□□ 0.79
Six2Q62232 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.99■□□□□ 0.79
Six2Q62232 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six2Q62232 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six2Q62232 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six2Q62232 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six2Q62232 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six2Q62232 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six2Q62232 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six2Q62232 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six2Q62232 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.98■□□□□ 0.79
Six2Q62232 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.98■□□□□ 0.79
Six2Q62232 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms