Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.67□□□□□ -0.22
Foxc1Q61572 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Foxc1Q61572 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Foxc1Q61572 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.66□□□□□ -0.22
Foxc1Q61572 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.66□□□□□ -0.22
Foxc1Q61572 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.66□□□□□ -0.22
Foxc1Q61572 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.66□□□□□ -0.22
Foxc1Q61572 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.66□□□□□ -0.22
Foxc1Q61572 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Foxc1Q61572 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.66□□□□□ -0.22
Foxc1Q61572 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxc1Q61572 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxc1Q61572 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
Foxc1Q61572 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxc1Q61572 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Foxc1Q61572 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxc1Q61572 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxc1Q61572 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Foxc1Q61572 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxc1Q61572 Gm10849-201ENSMUST00000100397 618 ntBASIC13.65□□□□□ -0.22
Foxc1Q61572 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Foxc1Q61572 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.65□□□□□ -0.22
Foxc1Q61572 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.65□□□□□ -0.22
Foxc1Q61572 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Foxc1Q61572 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxc1Q61572 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Foxc1Q61572 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxc1Q61572 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.65□□□□□ -0.22
Foxc1Q61572 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Foxc1Q61572 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Foxc1Q61572 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.65□□□□□ -0.22
Foxc1Q61572 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Foxc1Q61572 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Foxc1Q61572 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Foxc1Q61572 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.64□□□□□ -0.23
Foxc1Q61572 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Foxc1Q61572 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Foxc1Q61572 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.64□□□□□ -0.23
Foxc1Q61572 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxc1Q61572 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.64□□□□□ -0.23
Foxc1Q61572 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxc1Q61572 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxc1Q61572 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxc1Q61572 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Foxc1Q61572 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxc1Q61572 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Foxc1Q61572 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxc1Q61572 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxc1Q61572 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxc1Q61572 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.63□□□□□ -0.23
Foxc1Q61572 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Foxc1Q61572 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Gm10033-202ENSMUST00000211874 928 ntBASIC13.63□□□□□ -0.23
Foxc1Q61572 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.63□□□□□ -0.23
Foxc1Q61572 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.63□□□□□ -0.23
Foxc1Q61572 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Foxc1Q61572 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Foxc1Q61572 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxc1Q61572 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxc1Q61572 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxc1Q61572 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxc1Q61572 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms