Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ecm1Q61508 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ecm1Q61508 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.9■□□□□ 0.94
Ecm1Q61508 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ecm1Q61508 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Ecm1Q61508 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.9■□□□□ 0.94
Ecm1Q61508 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ecm1Q61508 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ecm1Q61508 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ecm1Q61508 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ecm1Q61508 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ecm1Q61508 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.89■□□□□ 0.94
Ecm1Q61508 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ecm1Q61508 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ecm1Q61508 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.89■□□□□ 0.93
Ecm1Q61508 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.89■□□□□ 0.93
Ecm1Q61508 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.89■□□□□ 0.93
Ecm1Q61508 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Ecm1Q61508 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.89■□□□□ 0.93
Ecm1Q61508 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ecm1Q61508 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ecm1Q61508 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ecm1Q61508 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Flg-201ENSMUST00000050758 1488 ntBASIC20.88■□□□□ 0.93
Ecm1Q61508 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.88■□□□□ 0.93
Ecm1Q61508 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ecm1Q61508 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ecm1Q61508 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.88■□□□□ 0.93
Ecm1Q61508 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Gm37055-201ENSMUST00000191866 133 ntBASIC20.88■□□□□ 0.93
Ecm1Q61508 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ecm1Q61508 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ecm1Q61508 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.87■□□□□ 0.93
Ecm1Q61508 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ecm1Q61508 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ecm1Q61508 Gm11927-201ENSMUST00000118472 759 ntBASIC20.87■□□□□ 0.93
Ecm1Q61508 Gm15565-201ENSMUST00000118890 427 ntBASIC20.87■□□□□ 0.93
Ecm1Q61508 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.87■□□□□ 0.93
Ecm1Q61508 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.87■□□□□ 0.93
Ecm1Q61508 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.87■□□□□ 0.93
Ecm1Q61508 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ecm1Q61508 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ecm1Q61508 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ecm1Q61508 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ecm1Q61508 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ecm1Q61508 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
Ecm1Q61508 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ecm1Q61508 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ecm1Q61508 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ecm1Q61508 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.86■□□□□ 0.93
Ecm1Q61508 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ecm1Q61508 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ecm1Q61508 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ecm1Q61508 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ecm1Q61508 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ecm1Q61508 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ecm1Q61508 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ecm1Q61508 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ecm1Q61508 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ecm1Q61508 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ecm1Q61508 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.85■□□□□ 0.93
Ecm1Q61508 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ecm1Q61508 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ecm1Q61508 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ecm1Q61508 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.85■□□□□ 0.93
Ecm1Q61508 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ecm1Q61508 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.84■□□□□ 0.93
Ecm1Q61508 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ecm1Q61508 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ecm1Q61508 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ecm1Q61508 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ecm1Q61508 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.84■□□□□ 0.93
Ecm1Q61508 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ecm1Q61508 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ecm1Q61508 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ecm1Q61508 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.84■□□□□ 0.93
Ecm1Q61508 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ecm1Q61508 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ecm1Q61508 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.83■□□□□ 0.93
Ecm1Q61508 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ecm1Q61508 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ecm1Q61508 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.83■□□□□ 0.93
Ecm1Q61508 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ecm1Q61508 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ecm1Q61508 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ecm1Q61508 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ecm1Q61508 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ecm1Q61508 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ecm1Q61508 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ecm1Q61508 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms