Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm11249-201ENSMUST00000117071 859 ntBASIC17.22■□□□□ 0.35
Urb1Q571H0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Urb1Q571H0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.22■□□□□ 0.35
Urb1Q571H0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Urb1Q571H0 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.22■□□□□ 0.35
Urb1Q571H0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.22■□□□□ 0.35
Urb1Q571H0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Urb1Q571H0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Urb1Q571H0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Urb1Q571H0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Urb1Q571H0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Urb1Q571H0 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.22■□□□□ 0.35
Urb1Q571H0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Urb1Q571H0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Urb1Q571H0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Urb1Q571H0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.21■□□□□ 0.35
Urb1Q571H0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Urb1Q571H0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.21■□□□□ 0.35
Urb1Q571H0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Urb1Q571H0 Gm43799-201ENSMUST00000201845 579 ntBASIC17.21■□□□□ 0.35
Urb1Q571H0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Urb1Q571H0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Urb1Q571H0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Urb1Q571H0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Urb1Q571H0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Urb1Q571H0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.21■□□□□ 0.35
Urb1Q571H0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Urb1Q571H0 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.21■□□□□ 0.35
Urb1Q571H0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Urb1Q571H0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Urb1Q571H0 Gm13158-201ENSMUST00000122007 736 ntBASIC17.21■□□□□ 0.34
Urb1Q571H0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.21■□□□□ 0.34
Urb1Q571H0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Urb1Q571H0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Urb1Q571H0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Urb1Q571H0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Urb1Q571H0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Urb1Q571H0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Urb1Q571H0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Urb1Q571H0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Urb1Q571H0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Urb1Q571H0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Urb1Q571H0 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.2■□□□□ 0.34
Urb1Q571H0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.2■□□□□ 0.34
Urb1Q571H0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Urb1Q571H0 Gm44549-201ENSMUST00000208351 577 ntBASIC17.2■□□□□ 0.34
Urb1Q571H0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.2■□□□□ 0.34
Urb1Q571H0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Urb1Q571H0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Urb1Q571H0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Urb1Q571H0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Urb1Q571H0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Urb1Q571H0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Urb1Q571H0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Urb1Q571H0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Urb1Q571H0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Urb1Q571H0 Gm2399-201ENSMUST00000104944 225 ntBASIC17.19■□□□□ 0.34
Urb1Q571H0 Gm6433-201ENSMUST00000118634 875 ntBASIC17.19■□□□□ 0.34
Urb1Q571H0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.19■□□□□ 0.34
Urb1Q571H0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Urb1Q571H0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.19■□□□□ 0.34
Urb1Q571H0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Urb1Q571H0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Urb1Q571H0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Urb1Q571H0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.19■□□□□ 0.34
Urb1Q571H0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Urb1Q571H0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Urb1Q571H0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Urb1Q571H0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Urb1Q571H0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Urb1Q571H0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Urb1Q571H0 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.18■□□□□ 0.34
Urb1Q571H0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Urb1Q571H0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Urb1Q571H0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Urb1Q571H0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Urb1Q571H0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Urb1Q571H0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Urb1Q571H0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.18■□□□□ 0.34
Urb1Q571H0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Urb1Q571H0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Urb1Q571H0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Urb1Q571H0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Urb1Q571H0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.17■□□□□ 0.34
Urb1Q571H0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Urb1Q571H0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Urb1Q571H0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.17■□□□□ 0.34
Urb1Q571H0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms