Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Gm7860-201ENSMUST00000121190 879 ntBASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nhej1Q3KNJ2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Nhej1Q3KNJ2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nhej1Q3KNJ2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Smad6-203ENSMUST00000179458 273 ntBASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nhej1Q3KNJ2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 Gm11421-201ENSMUST00000122124 294 ntBASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nhej1Q3KNJ2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nhej1Q3KNJ2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nhej1Q3KNJ2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nhej1Q3KNJ2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nhej1Q3KNJ2 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.92■□□□□ 0.78
Nhej1Q3KNJ2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.92■□□□□ 0.78
Nhej1Q3KNJ2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.92■□□□□ 0.78
Nhej1Q3KNJ2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nhej1Q3KNJ2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nhej1Q3KNJ2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nhej1Q3KNJ2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nhej1Q3KNJ2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nhej1Q3KNJ2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.91■□□□□ 0.78
Nhej1Q3KNJ2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Nhej1Q3KNJ2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nhej1Q3KNJ2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nhej1Q3KNJ2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nhej1Q3KNJ2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nhej1Q3KNJ2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 Gm27801-201ENSMUST00000184174 223 ntBASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nhej1Q3KNJ2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms