Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pdx1P52946 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdx1P52946 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdx1P52946 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdx1P52946 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdx1P52946 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdx1P52946 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdx1P52946 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdx1P52946 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.55■□□□□ 0.56
Pdx1P52946 Gm7514-201ENSMUST00000209475 934 ntBASIC18.55■□□□□ 0.56
Pdx1P52946 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdx1P52946 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdx1P52946 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdx1P52946 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdx1P52946 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pdx1P52946 BC021767-201ENSMUST00000126387 1716 ntBASIC18.54■□□□□ 0.56
Pdx1P52946 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdx1P52946 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
Pdx1P52946 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pdx1P52946 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.53■□□□□ 0.56
Pdx1P52946 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pdx1P52946 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.53■□□□□ 0.56
Pdx1P52946 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pdx1P52946 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdx1P52946 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pdx1P52946 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdx1P52946 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pdx1P52946 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pdx1P52946 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdx1P52946 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pdx1P52946 Gm6420-201ENSMUST00000193885 723 ntBASIC18.52■□□□□ 0.56
Pdx1P52946 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pdx1P52946 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdx1P52946 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pdx1P52946 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pdx1P52946 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pdx1P52946 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdx1P52946 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pdx1P52946 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pdx1P52946 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdx1P52946 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.51■□□□□ 0.55
Pdx1P52946 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdx1P52946 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdx1P52946 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdx1P52946 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pdx1P52946 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdx1P52946 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pdx1P52946 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdx1P52946 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdx1P52946 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.5■□□□□ 0.55
Pdx1P52946 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.5■□□□□ 0.55
Pdx1P52946 Nespas-201ENSMUST00000143738 1083 ntBASIC18.5■□□□□ 0.55
Pdx1P52946 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Pdx1P52946 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.5■□□□□ 0.55
Pdx1P52946 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Pdx1P52946 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pdx1P52946 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdx1P52946 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.5■□□□□ 0.55
Pdx1P52946 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdx1P52946 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pdx1P52946 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pdx1P52946 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pdx1P52946 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms