Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Mir1199-201ENSMUST00000117015 119 ntBASIC22.6■■□□□ 1.21
Atp6v1aP50516 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atp6v1aP50516 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.59■■□□□ 1.21
Atp6v1aP50516 Gm13158-201ENSMUST00000122007 736 ntBASIC22.59■■□□□ 1.21
Atp6v1aP50516 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Atp6v1aP50516 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Atp6v1aP50516 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atp6v1aP50516 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atp6v1aP50516 Gm10167-201ENSMUST00000150411 1479 ntBASIC22.59■■□□□ 1.21
Atp6v1aP50516 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.59■■□□□ 1.21
Atp6v1aP50516 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atp6v1aP50516 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atp6v1aP50516 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Atp6v1aP50516 CT010444.2-201ENSMUST00000217877 1629 ntBASIC22.58■■□□□ 1.21
Atp6v1aP50516 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atp6v1aP50516 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.58■■□□□ 1.21
Atp6v1aP50516 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atp6v1aP50516 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Atp6v1aP50516 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Atp6v1aP50516 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Atp6v1aP50516 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Atp6v1aP50516 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Atp6v1aP50516 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.57■■□□□ 1.2
Atp6v1aP50516 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
Atp6v1aP50516 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atp6v1aP50516 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atp6v1aP50516 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Atp6v1aP50516 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC22.56■■□□□ 1.2
Atp6v1aP50516 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Atp6v1aP50516 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Atp6v1aP50516 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atp6v1aP50516 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Atp6v1aP50516 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.55■■□□□ 1.2
Atp6v1aP50516 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
Atp6v1aP50516 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1aP50516 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1aP50516 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1aP50516 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1aP50516 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1aP50516 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1aP50516 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Atp6v1aP50516 AC160393.1-201ENSMUST00000218378 1279 ntBASIC22.54■■□□□ 1.2
Atp6v1aP50516 AC140264.2-202ENSMUST00000218746 817 ntBASIC22.54■■□□□ 1.2
Atp6v1aP50516 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1aP50516 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1aP50516 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
Atp6v1aP50516 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atp6v1aP50516 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Atp6v1aP50516 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC22.53■■□□□ 1.2
Atp6v1aP50516 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atp6v1aP50516 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Atp6v1aP50516 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atp6v1aP50516 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Atp6v1aP50516 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Atp6v1aP50516 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Atp6v1aP50516 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atp6v1aP50516 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atp6v1aP50516 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1aP50516 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1aP50516 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC22.52■■□□□ 1.2
Atp6v1aP50516 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1aP50516 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1aP50516 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1aP50516 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1aP50516 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Atp6v1aP50516 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Atp6v1aP50516 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC22.51■■□□□ 1.19
Atp6v1aP50516 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.51■■□□□ 1.19
Atp6v1aP50516 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Atp6v1aP50516 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Atp6v1aP50516 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Atp6v1aP50516 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms