Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sox6P40645 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sox6P40645 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.55■□□□□ 0.4
Sox6P40645 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.55■□□□□ 0.4
Sox6P40645 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox6P40645 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox6P40645 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox6P40645 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox6P40645 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.54■□□□□ 0.4
Sox6P40645 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox6P40645 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.54■□□□□ 0.4
Sox6P40645 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox6P40645 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sox6P40645 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.54■□□□□ 0.4
Sox6P40645 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.54■□□□□ 0.4
Sox6P40645 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.54■□□□□ 0.4
Sox6P40645 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox6P40645 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.54■□□□□ 0.4
Sox6P40645 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.54■□□□□ 0.4
Sox6P40645 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox6P40645 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox6P40645 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox6P40645 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.53■□□□□ 0.4
Sox6P40645 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.53■□□□□ 0.4
Sox6P40645 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Sox6P40645 Gm43173-201ENSMUST00000202246 593 ntBASIC17.53■□□□□ 0.4
Sox6P40645 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.53■□□□□ 0.4
Sox6P40645 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox6P40645 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox6P40645 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sox6P40645 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox6P40645 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.52■□□□□ 0.4
Sox6P40645 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox6P40645 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox6P40645 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox6P40645 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox6P40645 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sox6P40645 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sox6P40645 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sox6P40645 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sox6P40645 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Sox6P40645 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sox6P40645 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.51■□□□□ 0.39
Sox6P40645 Gm43017-201ENSMUST00000198296 752 ntBASIC17.51■□□□□ 0.39
Sox6P40645 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sox6P40645 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox6P40645 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.51■□□□□ 0.39
Sox6P40645 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.5■□□□□ 0.39
Sox6P40645 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox6P40645 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox6P40645 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox6P40645 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox6P40645 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sox6P40645 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox6P40645 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox6P40645 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox6P40645 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox6P40645 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox6P40645 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox6P40645 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sox6P40645 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sox6P40645 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox6P40645 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms