Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Timp3P39876 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Timp3P39876 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Timp3P39876 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Timp3P39876 Gm7290-201ENSMUST00000104990 617 ntBASIC15.27■□□□□ 0.04
Timp3P39876 Gm12918-201ENSMUST00000120234 636 ntBASIC15.27■□□□□ 0.04
Timp3P39876 Gm15710-201ENSMUST00000121821 636 ntBASIC15.27■□□□□ 0.04
Timp3P39876 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Timp3P39876 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.27■□□□□ 0.04
Timp3P39876 Gm5075-201ENSMUST00000196916 622 ntBASIC15.27■□□□□ 0.04
Timp3P39876 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.27■□□□□ 0.04
Timp3P39876 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.27■□□□□ 0.04
Timp3P39876 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Timp3P39876 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Timp3P39876 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.27■□□□□ 0.04
Timp3P39876 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.27■□□□□ 0.04
Timp3P39876 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Timp3P39876 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Timp3P39876 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Timp3P39876 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Timp3P39876 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.26■□□□□ 0.03
Timp3P39876 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Timp3P39876 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.26■□□□□ 0.03
Timp3P39876 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Timp3P39876 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.26■□□□□ 0.03
Timp3P39876 Gm38205-201ENSMUST00000192243 258 ntBASIC15.26■□□□□ 0.03
Timp3P39876 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Timp3P39876 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Timp3P39876 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.26■□□□□ 0.03
Timp3P39876 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Timp3P39876 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Timp3P39876 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Timp3P39876 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Timp3P39876 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Timp3P39876 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Timp3P39876 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Timp3P39876 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.25■□□□□ 0.03
Timp3P39876 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Timp3P39876 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Timp3P39876 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.25■□□□□ 0.03
Timp3P39876 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.25■□□□□ 0.03
Timp3P39876 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Timp3P39876 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Timp3P39876 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.25■□□□□ 0.03
Timp3P39876 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Timp3P39876 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Timp3P39876 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Timp3P39876 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp3P39876 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp3P39876 Gm13534-201ENSMUST00000121169 513 ntBASIC15.24■□□□□ 0.03
Timp3P39876 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Timp3P39876 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp3P39876 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp3P39876 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp3P39876 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.24■□□□□ 0.03
Timp3P39876 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp3P39876 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp3P39876 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Timp3P39876 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp3P39876 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp3P39876 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp3P39876 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.23■□□□□ 0.03
Timp3P39876 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp3P39876 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.23■□□□□ 0.03
Timp3P39876 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp3P39876 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.23■□□□□ 0.03
Timp3P39876 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Timp3P39876 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Timp3P39876 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.22■□□□□ 0.03
Timp3P39876 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.22■□□□□ 0.03
Timp3P39876 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.22■□□□□ 0.03
Timp3P39876 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Timp3P39876 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.22■□□□□ 0.03
Timp3P39876 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp3P39876 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Timp3P39876 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms