Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cd40P27512 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Cd40P27512 Gm42569-201ENSMUST00000200539 472 ntBASIC16.97■□□□□ 0.31
Cd40P27512 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.97■□□□□ 0.31
Cd40P27512 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cd40P27512 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.96■□□□□ 0.31
Cd40P27512 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.96■□□□□ 0.31
Cd40P27512 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cd40P27512 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cd40P27512 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40P27512 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cd40P27512 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Cd40P27512 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Iqck-206ENSMUST00000208658 2891 ntBASIC16.95■□□□□ 0.3
Cd40P27512 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.95■□□□□ 0.3
Cd40P27512 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.95■□□□□ 0.3
Cd40P27512 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40P27512 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40P27512 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40P27512 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cd40P27512 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40P27512 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40P27512 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.94■□□□□ 0.3
Cd40P27512 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40P27512 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40P27512 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40P27512 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40P27512 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.94■□□□□ 0.3
Cd40P27512 Gm6420-201ENSMUST00000193885 723 ntBASIC16.94■□□□□ 0.3
Cd40P27512 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.94■□□□□ 0.3
Cd40P27512 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cd40P27512 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40P27512 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.94■□□□□ 0.3
Cd40P27512 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cd40P27512 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40P27512 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40P27512 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cd40P27512 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.93■□□□□ 0.3
Cd40P27512 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cd40P27512 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40P27512 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40P27512 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40P27512 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cd40P27512 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40P27512 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40P27512 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40P27512 Nespas-201ENSMUST00000143738 1083 ntBASIC16.92■□□□□ 0.3
Cd40P27512 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.92■□□□□ 0.3
Cd40P27512 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40P27512 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40P27512 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40P27512 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40P27512 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40P27512 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40P27512 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.91■□□□□ 0.3
Cd40P27512 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cd40P27512 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms