Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Aldh1a1P24549 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Aldh1a1P24549 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Aldh1a1P24549 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.2■□□□□ 0.82
Aldh1a1P24549 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Aldh1a1P24549 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Aldh1a1P24549 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.19■□□□□ 0.82
Aldh1a1P24549 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aldh1a1P24549 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Aldh1a1P24549 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.19■□□□□ 0.82
Aldh1a1P24549 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aldh1a1P24549 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.19■□□□□ 0.82
Aldh1a1P24549 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Aldh1a1P24549 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aldh1a1P24549 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aldh1a1P24549 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aldh1a1P24549 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Aldh1a1P24549 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Aldh1a1P24549 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Aldh1a1P24549 Gm43799-201ENSMUST00000201845 579 ntBASIC20.18■□□□□ 0.82
Aldh1a1P24549 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.18■□□□□ 0.82
Aldh1a1P24549 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Aldh1a1P24549 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Aldh1a1P24549 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Aldh1a1P24549 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Aldh1a1P24549 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.17■□□□□ 0.82
Aldh1a1P24549 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Aldh1a1P24549 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Aldh1a1P24549 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Aldh1a1P24549 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Aldh1a1P24549 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Gm5417-201ENSMUST00000079706 384 ntBASIC20.16■□□□□ 0.82
Aldh1a1P24549 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Aldh1a1P24549 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Aldh1a1P24549 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aldh1a1P24549 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Aldh1a1P24549 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Aldh1a1P24549 Gm10231-201ENSMUST00000181584 441 ntBASIC20.15■□□□□ 0.82
Aldh1a1P24549 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aldh1a1P24549 Gm10175-202ENSMUST00000208752 441 ntBASIC20.15■□□□□ 0.82
Aldh1a1P24549 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.15■□□□□ 0.82
Aldh1a1P24549 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aldh1a1P24549 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aldh1a1P24549 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.15■□□□□ 0.82
Aldh1a1P24549 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aldh1a1P24549 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aldh1a1P24549 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aldh1a1P24549 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aldh1a1P24549 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.15■□□□□ 0.82
Aldh1a1P24549 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.14■□□□□ 0.81
Aldh1a1P24549 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.14■□□□□ 0.81
Aldh1a1P24549 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Aldh1a1P24549 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Aldh1a1P24549 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Aldh1a1P24549 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Aldh1a1P24549 Gm11927-201ENSMUST00000118472 759 ntBASIC20.13■□□□□ 0.81
Aldh1a1P24549 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.13■□□□□ 0.81
Aldh1a1P24549 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Aldh1a1P24549 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Aldh1a1P24549 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Aldh1a1P24549 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Aldh1a1P24549 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aldh1a1P24549 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aldh1a1P24549 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aldh1a1P24549 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Aldh1a1P24549 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.12■□□□□ 0.81
Aldh1a1P24549 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Aldh1a1P24549 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms