Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Mir6982-201ENSMUST00000184354 68 ntBASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Gm6365-201ENSMUST00000054711 744 ntBASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Gm10812-201ENSMUST00000099864 546 ntBASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf9P20334 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.14■□□□□ 0.01
Tnfrsf9P20334 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.14■□□□□ 0.01
Tnfrsf9P20334 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf9P20334 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Gm20049-201ENSMUST00000219950 730 ntBASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf9P20334 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms