Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RaraP11416 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RaraP11416 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RaraP11416 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RaraP11416 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RaraP11416 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.27■□□□□ 0.84
RaraP11416 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RaraP11416 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RaraP11416 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.27■□□□□ 0.84
RaraP11416 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RaraP11416 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RaraP11416 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.27■□□□□ 0.84
RaraP11416 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.27■□□□□ 0.84
RaraP11416 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RaraP11416 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RaraP11416 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RaraP11416 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RaraP11416 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RaraP11416 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RaraP11416 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RaraP11416 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RaraP11416 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RaraP11416 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RaraP11416 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RaraP11416 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RaraP11416 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RaraP11416 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RaraP11416 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RaraP11416 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RaraP11416 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RaraP11416 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RaraP11416 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RaraP11416 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.25■□□□□ 0.83
RaraP11416 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Gm45417-201ENSMUST00000209533 758 ntBASIC20.25■□□□□ 0.83
RaraP11416 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RaraP11416 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RaraP11416 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.24■□□□□ 0.83
RaraP11416 Gm40848-201ENSMUST00000221998 324 ntBASIC20.24■□□□□ 0.83
RaraP11416 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
RaraP11416 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RaraP11416 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RaraP11416 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RaraP11416 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RaraP11416 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RaraP11416 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RaraP11416 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RaraP11416 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RaraP11416 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RaraP11416 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RaraP11416 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
RaraP11416 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.23■□□□□ 0.83
RaraP11416 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RaraP11416 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RaraP11416 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RaraP11416 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RaraP11416 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RaraP11416 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RaraP11416 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RaraP11416 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RaraP11416 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RaraP11416 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RaraP11416 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.21■□□□□ 0.83
RaraP11416 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RaraP11416 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RaraP11416 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RaraP11416 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.21■□□□□ 0.83
RaraP11416 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RaraP11416 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RaraP11416 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RaraP11416 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RaraP11416 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RaraP11416 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RaraP11416 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms