Protein–RNA interactions for Protein: P07744

Krt4, Keratin, type II cytoskeletal 4, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt4P07744 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt4P07744 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt4P07744 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Krt4P07744 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt4P07744 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt4P07744 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt4P07744 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Krt4P07744 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt4P07744 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt4P07744 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt4P07744 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt4P07744 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt4P07744 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Krt4P07744 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt4P07744 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt4P07744 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt4P07744 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt4P07744 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.62■□□□□ 0.57
Krt4P07744 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt4P07744 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Krt4P07744 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.62■□□□□ 0.57
Krt4P07744 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt4P07744 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt4P07744 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt4P07744 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt4P07744 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.61■□□□□ 0.57
Krt4P07744 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt4P07744 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt4P07744 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt4P07744 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Krt4P07744 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.6■□□□□ 0.57
Krt4P07744 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt4P07744 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt4P07744 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt4P07744 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt4P07744 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.6■□□□□ 0.57
Krt4P07744 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Krt4P07744 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.59■□□□□ 0.57
Krt4P07744 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.59■□□□□ 0.57
Krt4P07744 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Gm7860-201ENSMUST00000121190 879 ntBASIC18.59■□□□□ 0.57
Krt4P07744 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.59■□□□□ 0.57
Krt4P07744 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Krt4P07744 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt4P07744 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Krt4P07744 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Krt4P07744 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Krt4P07744 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt4P07744 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Krt4P07744 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Krt4P07744 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.58■□□□□ 0.56
Krt4P07744 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Krt4P07744 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt4P07744 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt4P07744 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt4P07744 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Krt4P07744 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt4P07744 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Krt4P07744 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt4P07744 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.57■□□□□ 0.56
Krt4P07744 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt4P07744 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.57■□□□□ 0.56
Krt4P07744 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt4P07744 Gm43060-201ENSMUST00000200621 289 ntBASIC18.57■□□□□ 0.56
Krt4P07744 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.57■□□□□ 0.56
Krt4P07744 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt4P07744 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Krt4P07744 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt4P07744 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt4P07744 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.57■□□□□ 0.56
Krt4P07744 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt4P07744 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Krt4P07744 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt4P07744 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt4P07744 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms