Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
P06344 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
P06344 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.68■□□□□ 0.26
P06344 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Mir5133-201ENSMUST00000174955 77 ntBASIC16.68■□□□□ 0.26
P06344 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
P06344 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
P06344 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.68■□□□□ 0.26
P06344 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06344 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P06344 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
P06344 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.67■□□□□ 0.26
P06344 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P06344 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.67■□□□□ 0.26
P06344 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P06344 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
P06344 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P06344 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P06344 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.67■□□□□ 0.26
P06344 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
P06344 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.67■□□□□ 0.26
P06344 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P06344 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
P06344 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
P06344 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
P06344 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.66■□□□□ 0.26
P06344 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.66■□□□□ 0.26
P06344 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
P06344 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
P06344 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06344 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Gm6365-201ENSMUST00000054711 744 ntBASIC16.65■□□□□ 0.26
P06344 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
P06344 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P06344 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
P06344 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
P06344 Gm7290-201ENSMUST00000104990 617 ntBASIC16.64■□□□□ 0.25
P06344 Gm12918-201ENSMUST00000120234 636 ntBASIC16.64■□□□□ 0.25
P06344 Gm15710-201ENSMUST00000121821 636 ntBASIC16.64■□□□□ 0.25
P06344 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.64■□□□□ 0.25
P06344 Gm5075-201ENSMUST00000196916 622 ntBASIC16.64■□□□□ 0.25
P06344 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.64■□□□□ 0.25
P06344 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.64■□□□□ 0.25
P06344 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
P06344 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P06344 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P06344 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P06344 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.63■□□□□ 0.25
P06344 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
P06344 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P06344 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P06344 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P06344 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.63■□□□□ 0.25
P06344 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P06344 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P06344 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P06344 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.63■□□□□ 0.25
P06344 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
P06344 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
P06344 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms