Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vti1aO89116 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vti1aO89116 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.18■□□□□ 0.82
Vti1aO89116 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vti1aO89116 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vti1aO89116 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Vti1aO89116 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vti1aO89116 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vti1aO89116 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vti1aO89116 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vti1aO89116 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vti1aO89116 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vti1aO89116 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.17■□□□□ 0.82
Vti1aO89116 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vti1aO89116 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Vti1aO89116 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vti1aO89116 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Vti1aO89116 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Vti1aO89116 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vti1aO89116 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vti1aO89116 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vti1aO89116 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.16■□□□□ 0.82
Vti1aO89116 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Vti1aO89116 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Vti1aO89116 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.16■□□□□ 0.82
Vti1aO89116 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Vti1aO89116 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vti1aO89116 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Vti1aO89116 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Vti1aO89116 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vti1aO89116 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Vti1aO89116 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Vti1aO89116 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.15■□□□□ 0.82
Vti1aO89116 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Vti1aO89116 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.15■□□□□ 0.82
Vti1aO89116 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vti1aO89116 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vti1aO89116 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vti1aO89116 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.15■□□□□ 0.82
Vti1aO89116 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vti1aO89116 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vti1aO89116 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vti1aO89116 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vti1aO89116 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vti1aO89116 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vti1aO89116 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Vti1aO89116 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
Vti1aO89116 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vti1aO89116 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vti1aO89116 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Vti1aO89116 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vti1aO89116 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Vti1aO89116 Gm7860-201ENSMUST00000121190 879 ntBASIC20.14■□□□□ 0.81
Vti1aO89116 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.14■□□□□ 0.81
Vti1aO89116 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Vti1aO89116 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vti1aO89116 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vti1aO89116 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.14■□□□□ 0.81
Vti1aO89116 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vti1aO89116 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Vti1aO89116 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vti1aO89116 Gm13168-201ENSMUST00000121771 632 ntBASIC20.13■□□□□ 0.81
Vti1aO89116 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Vti1aO89116 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.13■□□□□ 0.81
Vti1aO89116 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Vti1aO89116 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vti1aO89116 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vti1aO89116 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vti1aO89116 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vti1aO89116 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vti1aO89116 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vti1aO89116 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.12■□□□□ 0.81
Vti1aO89116 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.12■□□□□ 0.81
Vti1aO89116 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.12■□□□□ 0.81
Vti1aO89116 Gm20049-201ENSMUST00000219950 730 ntBASIC20.12■□□□□ 0.81
Vti1aO89116 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.12■□□□□ 0.81
Vti1aO89116 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vti1aO89116 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Vti1aO89116 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vti1aO89116 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vti1aO89116 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vti1aO89116 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Vti1aO89116 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vti1aO89116 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vti1aO89116 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.11■□□□□ 0.81
Vti1aO89116 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vti1aO89116 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Vti1aO89116 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vti1aO89116 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.11■□□□□ 0.81
Vti1aO89116 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vti1aO89116 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Vti1aO89116 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vti1aO89116 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Vti1aO89116 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vti1aO89116 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vti1aO89116 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Vti1aO89116 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.1■□□□□ 0.81
Vti1aO89116 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.1■□□□□ 0.81
Vti1aO89116 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vti1aO89116 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms