Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.69■□□□□ 0.26
Hdac3O88895 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.69■□□□□ 0.26
Hdac3O88895 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Hdac3O88895 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Hdac3O88895 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.68■□□□□ 0.26
Hdac3O88895 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.68■□□□□ 0.26
Hdac3O88895 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac3O88895 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac3O88895 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hdac3O88895 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hdac3O88895 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac3O88895 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac3O88895 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac3O88895 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac3O88895 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.67■□□□□ 0.26
Hdac3O88895 Gm27801-201ENSMUST00000184174 223 ntBASIC16.67■□□□□ 0.26
Hdac3O88895 Gm43017-201ENSMUST00000198296 752 ntBASIC16.67■□□□□ 0.26
Hdac3O88895 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.67■□□□□ 0.26
Hdac3O88895 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hdac3O88895 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac3O88895 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac3O88895 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac3O88895 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac3O88895 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.67■□□□□ 0.26
Hdac3O88895 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac3O88895 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hdac3O88895 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac3O88895 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac3O88895 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Hdac3O88895 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac3O88895 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.66■□□□□ 0.26
Hdac3O88895 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac3O88895 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.66■□□□□ 0.26
Hdac3O88895 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Hdac3O88895 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac3O88895 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hdac3O88895 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac3O88895 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac3O88895 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Hdac3O88895 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac3O88895 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac3O88895 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.65■□□□□ 0.26
Hdac3O88895 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac3O88895 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac3O88895 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hdac3O88895 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Hdac3O88895 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.65■□□□□ 0.26
Hdac3O88895 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac3O88895 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hdac3O88895 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.65■□□□□ 0.26
Hdac3O88895 Grk6-206ENSMUST00000224995 2971 ntBASIC16.65■□□□□ 0.26
Hdac3O88895 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hdac3O88895 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Hdac3O88895 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hdac3O88895 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac3O88895 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac3O88895 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac3O88895 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac3O88895 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac3O88895 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac3O88895 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.64■□□□□ 0.25
Hdac3O88895 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.64■□□□□ 0.25
Hdac3O88895 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac3O88895 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Hdac3O88895 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac3O88895 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Hdac3O88895 Gm43060-201ENSMUST00000200621 289 ntBASIC16.64■□□□□ 0.25
Hdac3O88895 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac3O88895 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hdac3O88895 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac3O88895 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hdac3O88895 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac3O88895 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Hdac3O88895 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac3O88895 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hdac3O88895 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hdac3O88895 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms