Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.1■□□□□ 0.49
Best1O88870 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.1■□□□□ 0.49
Best1O88870 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.1■□□□□ 0.49
Best1O88870 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.1■□□□□ 0.49
Best1O88870 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.1■□□□□ 0.49
Best1O88870 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Best1O88870 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Best1O88870 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Best1O88870 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Best1O88870 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Best1O88870 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Best1O88870 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Best1O88870 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Best1O88870 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Best1O88870 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.09■□□□□ 0.49
Best1O88870 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Best1O88870 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.09■□□□□ 0.49
Best1O88870 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.09■□□□□ 0.49
Best1O88870 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Best1O88870 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.09■□□□□ 0.49
Best1O88870 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Best1O88870 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Best1O88870 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Best1O88870 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Best1O88870 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Best1O88870 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Best1O88870 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.09■□□□□ 0.49
Best1O88870 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Best1O88870 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Best1O88870 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Best1O88870 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Best1O88870 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Best1O88870 Gm20760-201ENSMUST00000179197 648 ntBASIC18.08■□□□□ 0.48
Best1O88870 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Best1O88870 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Best1O88870 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Best1O88870 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Best1O88870 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Best1O88870 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Best1O88870 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Best1O88870 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Best1O88870 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Best1O88870 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Best1O88870 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Best1O88870 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Best1O88870 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Best1O88870 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Best1O88870 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Best1O88870 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.06■□□□□ 0.48
Best1O88870 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Best1O88870 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Best1O88870 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Best1O88870 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Best1O88870 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Best1O88870 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Best1O88870 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Best1O88870 Gm44549-201ENSMUST00000208351 577 ntBASIC18.06■□□□□ 0.48
Best1O88870 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Best1O88870 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Best1O88870 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Best1O88870 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Best1O88870 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Best1O88870 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.05■□□□□ 0.48
Best1O88870 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.05■□□□□ 0.48
Best1O88870 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Best1O88870 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Best1O88870 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Best1O88870 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.05■□□□□ 0.48
Best1O88870 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Best1O88870 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Best1O88870 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Best1O88870 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Best1O88870 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Best1O88870 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Best1O88870 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Best1O88870 Gm10653-202ENSMUST00000139570 835 ntBASIC18.04■□□□□ 0.48
Best1O88870 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Best1O88870 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Best1O88870 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Best1O88870 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Best1O88870 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Best1O88870 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Best1O88870 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Best1O88870 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Best1O88870 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Best1O88870 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.03■□□□□ 0.48
Best1O88870 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Best1O88870 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Best1O88870 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Best1O88870 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Best1O88870 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.03■□□□□ 0.48
Best1O88870 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Best1O88870 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Best1O88870 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Best1O88870 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms