Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.98■□□□□ 0.31
Pdlim3O70209 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim3O70209 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim3O70209 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim3O70209 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim3O70209 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim3O70209 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim3O70209 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim3O70209 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim3O70209 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pdlim3O70209 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pdlim3O70209 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pdlim3O70209 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.97■□□□□ 0.31
Pdlim3O70209 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim3O70209 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim3O70209 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pdlim3O70209 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim3O70209 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim3O70209 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.96■□□□□ 0.31
Pdlim3O70209 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.96■□□□□ 0.31
Pdlim3O70209 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim3O70209 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim3O70209 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.96■□□□□ 0.31
Pdlim3O70209 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.96■□□□□ 0.31
Pdlim3O70209 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim3O70209 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim3O70209 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim3O70209 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pdlim3O70209 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pdlim3O70209 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pdlim3O70209 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.95■□□□□ 0.3
Pdlim3O70209 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Gm14117-201ENSMUST00000122417 843 ntBASIC16.95■□□□□ 0.3
Pdlim3O70209 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.95■□□□□ 0.3
Pdlim3O70209 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.95■□□□□ 0.3
Pdlim3O70209 Gm45102-201ENSMUST00000207427 857 ntBASIC16.95■□□□□ 0.3
Pdlim3O70209 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.95■□□□□ 0.3
Pdlim3O70209 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pdlim3O70209 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.95■□□□□ 0.3
Pdlim3O70209 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.95■□□□□ 0.3
Pdlim3O70209 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.95■□□□□ 0.3
Pdlim3O70209 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.95■□□□□ 0.3
Pdlim3O70209 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.95■□□□□ 0.3
Pdlim3O70209 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim3O70209 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.95■□□□□ 0.3
Pdlim3O70209 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.94■□□□□ 0.3
Pdlim3O70209 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Pdlim3O70209 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Pdlim3O70209 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Pdlim3O70209 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pdlim3O70209 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim3O70209 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim3O70209 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim3O70209 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Pdlim3O70209 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pdlim3O70209 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim3O70209 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim3O70209 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pdlim3O70209 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms