Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Per2O54943 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per2O54943 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per2O54943 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per2O54943 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per2O54943 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Per2O54943 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Per2O54943 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Per2O54943 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per2O54943 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.55■□□□□ 0.72
Per2O54943 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per2O54943 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.55■□□□□ 0.72
Per2O54943 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Per2O54943 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per2O54943 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per2O54943 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Per2O54943 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Per2O54943 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per2O54943 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per2O54943 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Per2O54943 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.54■□□□□ 0.72
Per2O54943 Gm38205-201ENSMUST00000192243 258 ntBASIC19.54■□□□□ 0.72
Per2O54943 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Per2O54943 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.54■□□□□ 0.72
Per2O54943 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per2O54943 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per2O54943 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per2O54943 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per2O54943 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.54■□□□□ 0.72
Per2O54943 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Per2O54943 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Per2O54943 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Per2O54943 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.53■□□□□ 0.72
Per2O54943 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Per2O54943 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.53■□□□□ 0.72
Per2O54943 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Per2O54943 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per2O54943 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Per2O54943 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Per2O54943 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Per2O54943 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Per2O54943 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Per2O54943 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Per2O54943 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Per2O54943 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.52■□□□□ 0.72
Per2O54943 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Per2O54943 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.52■□□□□ 0.72
Per2O54943 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Per2O54943 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Per2O54943 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Per2O54943 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Per2O54943 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Per2O54943 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Per2O54943 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Per2O54943 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.51■□□□□ 0.71
Per2O54943 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.51■□□□□ 0.71
Per2O54943 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
Per2O54943 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Per2O54943 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
Per2O54943 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Per2O54943 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Per2O54943 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Per2O54943 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Per2O54943 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Per2O54943 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Per2O54943 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Per2O54943 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.5■□□□□ 0.71
Per2O54943 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Per2O54943 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
Per2O54943 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Per2O54943 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Per2O54943 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms