Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Phox2bO35690 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.78■□□□□ 0.6
Phox2bO35690 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Phox2bO35690 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Phox2bO35690 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Phox2bO35690 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Phox2bO35690 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Phox2bO35690 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.78■□□□□ 0.6
Phox2bO35690 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Phox2bO35690 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.78■□□□□ 0.6
Phox2bO35690 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Phox2bO35690 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Phox2bO35690 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Phox2bO35690 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Phox2bO35690 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Phox2bO35690 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Phox2bO35690 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Phox2bO35690 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.77■□□□□ 0.6
Phox2bO35690 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Phox2bO35690 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Phox2bO35690 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Phox2bO35690 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Phox2bO35690 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Phox2bO35690 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Phox2bO35690 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Phox2bO35690 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Phox2bO35690 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Phox2bO35690 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Phox2bO35690 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Phox2bO35690 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Phox2bO35690 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Phox2bO35690 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Phox2bO35690 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.75■□□□□ 0.59
Phox2bO35690 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.75■□□□□ 0.59
Phox2bO35690 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Phox2bO35690 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Phox2bO35690 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phox2bO35690 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Phox2bO35690 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Phox2bO35690 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Phox2bO35690 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Phox2bO35690 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.74■□□□□ 0.59
Phox2bO35690 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Phox2bO35690 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.74■□□□□ 0.59
Phox2bO35690 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Phox2bO35690 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.74■□□□□ 0.59
Phox2bO35690 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Phox2bO35690 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Phox2bO35690 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
Phox2bO35690 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Phox2bO35690 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Phox2bO35690 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Phox2bO35690 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Phox2bO35690 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Phox2bO35690 Golph3-202ENSMUST00000226517 2359 ntBASIC18.74■□□□□ 0.59
Phox2bO35690 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Phox2bO35690 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Phox2bO35690 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Phox2bO35690 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Phox2bO35690 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Phox2bO35690 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Phox2bO35690 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Phox2bO35690 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Phox2bO35690 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.73■□□□□ 0.59
Phox2bO35690 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Phox2bO35690 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Phox2bO35690 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Phox2bO35690 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Phox2bO35690 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Phox2bO35690 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.72■□□□□ 0.59
Phox2bO35690 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.72■□□□□ 0.59
Phox2bO35690 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.72■□□□□ 0.59
Phox2bO35690 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Phox2bO35690 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Phox2bO35690 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Phox2bO35690 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Phox2bO35690 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phox2bO35690 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Phox2bO35690 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Phox2bO35690 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phox2bO35690 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Phox2bO35690 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.71■□□□□ 0.59
Phox2bO35690 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phox2bO35690 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Phox2bO35690 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.71■□□□□ 0.59
Phox2bO35690 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phox2bO35690 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.71■□□□□ 0.59
Phox2bO35690 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms