Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk4O35493 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk4O35493 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Clk4O35493 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Clk4O35493 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk4O35493 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk4O35493 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk4O35493 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.9■□□□□ 0.46
Clk4O35493 Golph3-205ENSMUST00000228671 2842 ntBASIC17.9■□□□□ 0.46
Clk4O35493 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk4O35493 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clk4O35493 Grk6-206ENSMUST00000224995 2971 ntBASIC17.9■□□□□ 0.46
Clk4O35493 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Clk4O35493 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.9■□□□□ 0.46
Clk4O35493 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk4O35493 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk4O35493 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Clk4O35493 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk4O35493 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk4O35493 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clk4O35493 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Clk4O35493 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Clk4O35493 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clk4O35493 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Clk4O35493 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk4O35493 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Clk4O35493 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk4O35493 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Clk4O35493 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clk4O35493 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clk4O35493 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk4O35493 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.89■□□□□ 0.45
Clk4O35493 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk4O35493 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Clk4O35493 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Clk4O35493 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clk4O35493 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk4O35493 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Clk4O35493 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk4O35493 AV356131-201ENSMUST00000206201 750 ntBASIC17.88■□□□□ 0.45
Clk4O35493 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.88■□□□□ 0.45
Clk4O35493 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk4O35493 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clk4O35493 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk4O35493 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk4O35493 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Clk4O35493 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk4O35493 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk4O35493 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk4O35493 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk4O35493 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk4O35493 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Clk4O35493 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Clk4O35493 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clk4O35493 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk4O35493 Gm38205-201ENSMUST00000192243 258 ntBASIC17.87■□□□□ 0.45
Clk4O35493 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk4O35493 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.87■□□□□ 0.45
Clk4O35493 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clk4O35493 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Clk4O35493 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Clk4O35493 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk4O35493 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk4O35493 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.86■□□□□ 0.45
Clk4O35493 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Clk4O35493 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Clk4O35493 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Clk4O35493 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.86■□□□□ 0.45
Clk4O35493 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.86■□□□□ 0.45
Clk4O35493 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.86■□□□□ 0.45
Clk4O35493 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Clk4O35493 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clk4O35493 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.86■□□□□ 0.45
Clk4O35493 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk4O35493 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.85■□□□□ 0.45
Clk4O35493 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.85■□□□□ 0.45
Clk4O35493 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk4O35493 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk4O35493 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk4O35493 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk4O35493 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk4O35493 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Clk4O35493 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clk4O35493 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clk4O35493 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clk4O35493 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms