Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.43■□□□□ 0.7
Ebf3O08791 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.43■□□□□ 0.7
Ebf3O08791 Gm10252-201ENSMUST00000209541 832 ntBASIC19.43■□□□□ 0.7
Ebf3O08791 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf3O08791 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.43■□□□□ 0.7
Ebf3O08791 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf3O08791 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ebf3O08791 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ebf3O08791 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf3O08791 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf3O08791 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.43■□□□□ 0.7
Ebf3O08791 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf3O08791 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.42■□□□□ 0.7
Ebf3O08791 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.42■□□□□ 0.7
Ebf3O08791 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Ebf3O08791 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
Ebf3O08791 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ebf3O08791 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf3O08791 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ebf3O08791 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.41■□□□□ 0.7
Ebf3O08791 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ebf3O08791 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ebf3O08791 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ebf3O08791 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ebf3O08791 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ebf3O08791 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ebf3O08791 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.41■□□□□ 0.7
Ebf3O08791 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ebf3O08791 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ebf3O08791 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ebf3O08791 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ebf3O08791 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ebf3O08791 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ebf3O08791 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ebf3O08791 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ebf3O08791 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Ebf3O08791 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ebf3O08791 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.4■□□□□ 0.7
Ebf3O08791 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ebf3O08791 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ebf3O08791 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ebf3O08791 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.39■□□□□ 0.69
Ebf3O08791 Gm26524-201ENSMUST00000192339 390 ntBASIC19.39■□□□□ 0.69
Ebf3O08791 Trmt13-210ENSMUST00000198454 880 ntBASIC19.39■□□□□ 0.69
Ebf3O08791 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ebf3O08791 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ebf3O08791 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ebf3O08791 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ebf3O08791 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ebf3O08791 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ebf3O08791 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ebf3O08791 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ebf3O08791 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ebf3O08791 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ebf3O08791 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ebf3O08791 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Ebf3O08791 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ebf3O08791 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ebf3O08791 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ebf3O08791 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.37■□□□□ 0.69
Ebf3O08791 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ebf3O08791 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.37■□□□□ 0.69
Ebf3O08791 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.37■□□□□ 0.69
Ebf3O08791 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.37■□□□□ 0.69
Ebf3O08791 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Ebf3O08791 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.37■□□□□ 0.69
Ebf3O08791 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ebf3O08791 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ebf3O08791 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Ebf3O08791 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Ebf3O08791 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.36■□□□□ 0.69
Ebf3O08791 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ebf3O08791 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.36■□□□□ 0.69
Ebf3O08791 Rab3c-203ENSMUST00000224180 967 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms