Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ift140E9PY46 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Ift140E9PY46 Gm42545-201ENSMUST00000202755 922 ntBASIC30.09■■■□□ 2.41
Ift140E9PY46 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Ift140E9PY46 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ift140E9PY46 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Ift140E9PY46 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ift140E9PY46 Gm9103-201ENSMUST00000119371 405 ntBASIC30.08■■■□□ 2.41
Ift140E9PY46 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ift140E9PY46 Gm18959-201ENSMUST00000208954 655 ntBASIC30.08■■■□□ 2.41
Ift140E9PY46 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ift140E9PY46 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ift140E9PY46 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ift140E9PY46 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ift140E9PY46 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ift140E9PY46 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
Ift140E9PY46 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ift140E9PY46 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ift140E9PY46 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ift140E9PY46 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ift140E9PY46 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Ift140E9PY46 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Ift140E9PY46 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC30.06■■■□□ 2.4
Ift140E9PY46 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Ift140E9PY46 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ift140E9PY46 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ift140E9PY46 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ift140E9PY46 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
Ift140E9PY46 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ift140E9PY46 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Ift140E9PY46 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ift140E9PY46 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ift140E9PY46 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ift140E9PY46 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC30.05■■■□□ 2.4
Ift140E9PY46 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Ift140E9PY46 AC159205.6-201ENSMUST00000224935 887 ntBASIC30.05■■■□□ 2.4
Ift140E9PY46 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ift140E9PY46 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ift140E9PY46 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Ift140E9PY46 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC30.04■■■□□ 2.4
Ift140E9PY46 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Ift140E9PY46 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ift140E9PY46 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ift140E9PY46 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ift140E9PY46 Ank2-226ENSMUST00000189368 339 ntBASIC30.04■■■□□ 2.4
Ift140E9PY46 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC30.04■■■□□ 2.4
Ift140E9PY46 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ift140E9PY46 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Ift140E9PY46 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ift140E9PY46 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Ift140E9PY46 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ift140E9PY46 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ift140E9PY46 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ift140E9PY46 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC30.03■■■□□ 2.4
Ift140E9PY46 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
Ift140E9PY46 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ift140E9PY46 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ift140E9PY46 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Ift140E9PY46 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ift140E9PY46 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ift140E9PY46 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Ift140E9PY46 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ift140E9PY46 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC30.02■■■□□ 2.4
Ift140E9PY46 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ift140E9PY46 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Ift140E9PY46 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ift140E9PY46 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
Ift140E9PY46 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ift140E9PY46 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Ift140E9PY46 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Ift140E9PY46 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC30.01■■■□□ 2.4
Ift140E9PY46 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Ift140E9PY46 Gm20100-201ENSMUST00000209418 2272 ntBASIC30.01■■■□□ 2.39
Ift140E9PY46 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Ift140E9PY46 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Ift140E9PY46 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC30.01■■■□□ 2.39
Ift140E9PY46 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC30■■■□□ 2.39
Ift140E9PY46 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ift140E9PY46 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Ift140E9PY46 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ift140E9PY46 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC30■■■□□ 2.39
Ift140E9PY46 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Ift140E9PY46 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ift140E9PY46 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ift140E9PY46 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC30■■■□□ 2.39
Ift140E9PY46 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC30■■■□□ 2.39
Ift140E9PY46 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Ift140E9PY46 Gm12382-201ENSMUST00000122005 922 ntBASIC29.99■■■□□ 2.39
Ift140E9PY46 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC29.99■■■□□ 2.39
Ift140E9PY46 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Ift140E9PY46 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC29.99■■■□□ 2.39
Ift140E9PY46 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ift140E9PY46 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ift140E9PY46 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ift140E9PY46 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ift140E9PY46 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Ift140E9PY46 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ift140E9PY46 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC29.98■■■□□ 2.39
Ift140E9PY46 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Ift140E9PY46 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms