Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh2d4bA6X942 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh2d4bA6X942 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh2d4bA6X942 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh2d4bA6X942 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.02■□□□□ 0.8
Sh2d4bA6X942 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh2d4bA6X942 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.02■□□□□ 0.8
Sh2d4bA6X942 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sh2d4bA6X942 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.02■□□□□ 0.8
Sh2d4bA6X942 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sh2d4bA6X942 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.01■□□□□ 0.79
Sh2d4bA6X942 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sh2d4bA6X942 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh2d4bA6X942 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh2d4bA6X942 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sh2d4bA6X942 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh2d4bA6X942 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh2d4bA6X942 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.01■□□□□ 0.79
Sh2d4bA6X942 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.01■□□□□ 0.79
Sh2d4bA6X942 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.01■□□□□ 0.79
Sh2d4bA6X942 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.01■□□□□ 0.79
Sh2d4bA6X942 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh2d4bA6X942 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sh2d4bA6X942 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sh2d4bA6X942 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
Sh2d4bA6X942 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh2d4bA6X942 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sh2d4bA6X942 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20■□□□□ 0.79
Sh2d4bA6X942 CT030146.1-201ENSMUST00000220919 217 ntBASIC20■□□□□ 0.79
Sh2d4bA6X942 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Sh2d4bA6X942 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Sh2d4bA6X942 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20■□□□□ 0.79
Sh2d4bA6X942 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh2d4bA6X942 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh2d4bA6X942 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh2d4bA6X942 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d4bA6X942 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d4bA6X942 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d4bA6X942 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d4bA6X942 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sh2d4bA6X942 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d4bA6X942 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.99■□□□□ 0.79
Sh2d4bA6X942 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.99■□□□□ 0.79
Sh2d4bA6X942 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d4bA6X942 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d4bA6X942 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d4bA6X942 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d4bA6X942 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Sh2d4bA6X942 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh2d4bA6X942 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Sh2d4bA6X942 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sh2d4bA6X942 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Gm38205-201ENSMUST00000192243 258 ntBASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Sh2d4bA6X942 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Gm13534-201ENSMUST00000121169 513 ntBASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Sh2d4bA6X942 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh2d4bA6X942 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh2d4bA6X942 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Sh2d4bA6X942 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Sh2d4bA6X942 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh2d4bA6X942 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms