Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.78■□□□□ 0.76
Scn1aA2APX8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.78■□□□□ 0.76
Scn1aA2APX8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1aA2APX8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.77■□□□□ 0.76
Scn1aA2APX8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn1aA2APX8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn1aA2APX8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn1aA2APX8 Rab3c-203ENSMUST00000224180 967 ntBASIC19.77■□□□□ 0.76
Scn1aA2APX8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn1aA2APX8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn1aA2APX8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Scn1aA2APX8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Scn1aA2APX8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1aA2APX8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1aA2APX8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1aA2APX8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1aA2APX8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1aA2APX8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Scn1aA2APX8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn1aA2APX8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1aA2APX8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1aA2APX8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1aA2APX8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Scn1aA2APX8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Scn1aA2APX8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1aA2APX8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
Scn1aA2APX8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1aA2APX8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1aA2APX8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1aA2APX8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scn1aA2APX8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1aA2APX8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.75■□□□□ 0.75
Scn1aA2APX8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1aA2APX8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1aA2APX8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1aA2APX8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Scn1aA2APX8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn1aA2APX8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn1aA2APX8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn1aA2APX8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Scn1aA2APX8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn1aA2APX8 Gm10653-202ENSMUST00000139570 835 ntBASIC19.74■□□□□ 0.75
Scn1aA2APX8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.74■□□□□ 0.75
Scn1aA2APX8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn1aA2APX8 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.73■□□□□ 0.75
Scn1aA2APX8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1aA2APX8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1aA2APX8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.73■□□□□ 0.75
Scn1aA2APX8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.73■□□□□ 0.75
Scn1aA2APX8 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.73■□□□□ 0.75
Scn1aA2APX8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1aA2APX8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1aA2APX8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1aA2APX8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.73■□□□□ 0.75
Scn1aA2APX8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Scn1aA2APX8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1aA2APX8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Gm20049-201ENSMUST00000219950 730 ntBASIC19.72■□□□□ 0.75
Scn1aA2APX8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Scn1aA2APX8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.72■□□□□ 0.75
Scn1aA2APX8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1aA2APX8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1aA2APX8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.71■□□□□ 0.75
Scn1aA2APX8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Scn1aA2APX8 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.71■□□□□ 0.75
Scn1aA2APX8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn1aA2APX8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn1aA2APX8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scn1aA2APX8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn1aA2APX8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scn1aA2APX8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Scn1aA2APX8 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.71■□□□□ 0.75
Scn1aA2APX8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scn1aA2APX8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn1aA2APX8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Scn1aA2APX8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1aA2APX8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1aA2APX8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.7■□□□□ 0.74
Scn1aA2APX8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms