Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IsxA1A546 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IsxA1A546 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IsxA1A546 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IsxA1A546 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IsxA1A546 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IsxA1A546 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
IsxA1A546 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
IsxA1A546 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.4■□□□□ 0.38
IsxA1A546 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.4■□□□□ 0.38
IsxA1A546 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.4■□□□□ 0.38
IsxA1A546 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
IsxA1A546 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.4■□□□□ 0.38
IsxA1A546 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
IsxA1A546 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IsxA1A546 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
IsxA1A546 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IsxA1A546 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IsxA1A546 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IsxA1A546 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
IsxA1A546 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
IsxA1A546 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IsxA1A546 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IsxA1A546 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
IsxA1A546 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
IsxA1A546 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IsxA1A546 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IsxA1A546 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.38■□□□□ 0.37
IsxA1A546 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
IsxA1A546 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.38■□□□□ 0.37
IsxA1A546 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
IsxA1A546 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IsxA1A546 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
IsxA1A546 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
IsxA1A546 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
IsxA1A546 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.37■□□□□ 0.37
IsxA1A546 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
IsxA1A546 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
IsxA1A546 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IsxA1A546 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.36■□□□□ 0.37
IsxA1A546 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.36■□□□□ 0.37
IsxA1A546 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
IsxA1A546 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.36■□□□□ 0.37
IsxA1A546 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.36■□□□□ 0.37
IsxA1A546 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.36■□□□□ 0.37
IsxA1A546 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.36■□□□□ 0.37
IsxA1A546 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IsxA1A546 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IsxA1A546 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.35■□□□□ 0.37
IsxA1A546 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IsxA1A546 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms