Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm27045-201ENSMUST00000182145 1402 ntBASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Igkv1-88A0A140T8N1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm5812-201ENSMUST00000061073 957 ntBASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm45640-201ENSMUST00000210665 1896 ntBASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Igkv1-88A0A140T8N1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Igkv1-88A0A140T8N1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms