Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Gm10698-201ENSMUST00000182663 604 ntBASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trav8n-2A0A075B633 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8n-2A0A075B633 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.19■□□□□ 0.34
Trav8n-2A0A075B633 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Mir1199-201ENSMUST00000117015 119 ntBASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav8n-2A0A075B633 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8n-2A0A075B633 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Gm37055-201ENSMUST00000191866 133 ntBASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8n-2A0A075B633 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Flg-201ENSMUST00000050758 1488 ntBASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms