Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ccdc50-ps-201ENSMUST00000118044 941 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Defa-ps3-201ENSMUST00000142705 282 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm6706-201ENSMUST00000145087 318 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm12496-201ENSMUST00000154377 668 ntTSL 3 BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm7031-201ENSMUST00000173709 919 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm5350-201ENSMUST00000182057 1002 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 4930512B01Rik-202ENSMUST00000188608 983 ntTSL 3 BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm37185-201ENSMUST00000193852 410 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 4930474B08Rik-201ENSMUST00000194161 837 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm7850-201ENSMUST00000212909 712 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm26244-201ENSMUST00000083435 164 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Tac1-201ENSMUST00000090679 980 ntTSL 5 BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Tmem241-203ENSMUST00000092075 595 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm16026-201ENSMUST00000094774 580 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Tom1l1-203ENSMUST00000107868 2093 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm43413-201ENSMUST00000200411 1566 ntBASIC9.59□□□□□ -0.87
Nup88Q8CEC0 AC131743.4-201ENSMUST00000221638 1553 ntBASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Lhx6-202ENSMUST00000112961 3292 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm38947-201ENSMUST00000209940 2720 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Aldoart1-202ENSMUST00000179234 2050 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm7203-201ENSMUST00000210880 1404 ntBASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm7645-201ENSMUST00000119008 788 ntBASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm2214-201ENSMUST00000121333 330 ntBASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm5270-201ENSMUST00000121506 1002 ntBASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm14048-201ENSMUST00000121864 1268 ntBASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm12780-201ENSMUST00000122458 645 ntBASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm43129-201ENSMUST00000201237 603 ntTSL 3 BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 AC144783.1-201ENSMUST00000219103 960 ntBASIC9.59□□□□□ -0.87
Nup88Q8CEC0 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm14267-208ENSMUST00000228324 1189 ntBASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Mrgprb4-201ENSMUST00000094388 1219 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Nt5c1b-202ENSMUST00000118657 1792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Nmnat1-202ENSMUST00000105693 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm16701-201ENSMUST00000181309 1627 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Gm37995-201ENSMUST00000194958 1714 ntBASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Nup88Q8CEC0 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC9.59□□□□□ -0.88
Nup88Q8CEC0 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm37647-201ENSMUST00000194556 3143 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Tsnaxip1-201ENSMUST00000034365 2210 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm43980-201ENSMUST00000204899 1612 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm14561-201ENSMUST00000117376 798 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm12124-201ENSMUST00000120504 679 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Mir7011-201ENSMUST00000183768 73 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm18821-201ENSMUST00000184135 709 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm18353-201ENSMUST00000185906 784 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm29068-201ENSMUST00000191607 400 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm38226-201ENSMUST00000192207 521 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm37247-201ENSMUST00000192549 730 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm7115-201ENSMUST00000193706 832 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm45889-201ENSMUST00000209535 1057 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 AC167013.3-201ENSMUST00000228110 989 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm5564-201ENSMUST00000034916 967 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Olfr1043-201ENSMUST00000099907 945 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms