Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 AC153862.1-201ENSMUST00000215700 3349 ntBASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 4930466I24Rik-201ENSMUST00000144105 2264 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Gm12792-201ENSMUST00000117669 1019 ntBASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Gm11838-201ENSMUST00000121999 231 ntBASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Gm26977-201ENSMUST00000183151 996 ntBASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Mir6415-201ENSMUST00000184064 100 ntBASIC9.62□□□□□ -0.87
Nup88Q8CEC0 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Gm8686-201ENSMUST00000203028 388 ntBASIC9.62□□□□□ -0.87
Nup88Q8CEC0 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Gm5609-201ENSMUST00000210008 1267 ntBASIC9.62□□□□□ -0.87
Nup88Q8CEC0 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 AC124709.1-201ENSMUST00000227296 620 ntBASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Olfr1255-201ENSMUST00000057369 933 ntBASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Zfp473-201ENSMUST00000060270 3800 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Nrg4-213ENSMUST00000164721 1927 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup88Q8CEC0 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Dalir-201ENSMUST00000188773 2170 ntBASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 B020031H02Rik-201ENSMUST00000209977 3673 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm23835-201ENSMUST00000104439 132 ntBASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm12163-201ENSMUST00000121597 389 ntBASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm17157-201ENSMUST00000172397 348 ntBASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm26929-201ENSMUST00000182703 753 ntBASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm43247-201ENSMUST00000198638 481 ntBASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm45834-201ENSMUST00000212445 454 ntBASIC9.61□□□□□ -0.87
Nup88Q8CEC0 9530020I12Rik-202ENSMUST00000218368 1235 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 AC159649.1-201ENSMUST00000220851 977 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Vmn1r210-201ENSMUST00000072044 921 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Olfr38-201ENSMUST00000074499 954 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm9903-201ENSMUST00000181102 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Rbx1-201ENSMUST00000023036 1655 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup88Q8CEC0 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 AC154828.1-201ENSMUST00000220696 2810 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 CT025600.1-202ENSMUST00000220264 2510 ntTSL 5 BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm45292-201ENSMUST00000211232 2207 ntBASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Zfp82-207ENSMUST00000183190 1906 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Nup88Q8CEC0 Gm24665-201ENSMUST00000104160 129 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms