Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Gm11468-201ENSMUST00000152987 383 ntTSL 2 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Gm37450-201ENSMUST00000195218 170 ntBASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Gm45756-201ENSMUST00000212491 407 ntBASIC9.67□□□□□ -0.86
Nup88Q8CEC0 AC124577.1-201ENSMUST00000214044 487 ntBASIC9.67□□□□□ -0.86
Nup88Q8CEC0 AC160112.1-201ENSMUST00000219139 714 ntBASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Gm22830-201ENSMUST00000083772 130 ntBASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Gm39459-201ENSMUST00000215662 1895 ntTSL 5 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Rars2-201ENSMUST00000029968 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 AC113304.1-201ENSMUST00000214014 1833 ntTSL 5 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Gm37334-201ENSMUST00000192325 2938 ntBASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Atp6v1h-205ENSMUST00000192847 1662 ntTSL 5 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 BC051077-201ENSMUST00000181440 2044 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm41-201ENSMUST00000116183 1023 ntBASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm13879-201ENSMUST00000118308 242 ntBASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 A230009B12Rik-201ENSMUST00000159422 898 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Mir3085-201ENSMUST00000175493 89 ntBASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Mir5625-201ENSMUST00000176598 80 ntBASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm6695-201ENSMUST00000177264 1172 ntBASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Plut-203ENSMUST00000201192 569 ntTSL 3 BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm30196-201ENSMUST00000208957 160 ntBASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm8512-201ENSMUST00000215367 471 ntBASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm4120-201ENSMUST00000220456 578 ntBASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 AC165260.5-201ENSMUST00000224640 1247 ntBASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Oard1-201ENSMUST00000046651 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup88Q8CEC0 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC9.66□□□□□ -0.86
Nup88Q8CEC0 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Gm14648-201ENSMUST00000119328 483 ntBASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Rpl21-ps15-201ENSMUST00000121545 483 ntBASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Trp53-ps-201ENSMUST00000166597 141 ntBASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Gm7191-201ENSMUST00000182678 990 ntBASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Gm43797-201ENSMUST00000198221 532 ntBASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Gm42529-201ENSMUST00000201843 741 ntTSL 3 BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Gm18060-201ENSMUST00000207407 564 ntBASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Gm2734-201ENSMUST00000208561 743 ntBASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Gm34278-201ENSMUST00000220534 622 ntTSL 5 BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 AC166822.2-201ENSMUST00000228746 275 ntBASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Rpl21-ps7-201ENSMUST00000077420 483 ntBASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Serpina1f-201ENSMUST00000021490 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Pilrb2-201ENSMUST00000164886 1807 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nup88Q8CEC0 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Nup88Q8CEC0 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nup88Q8CEC0 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Nup88Q8CEC0 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nup88Q8CEC0 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Nup88Q8CEC0 Ndrg1-201ENSMUST00000005256 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nup88Q8CEC0 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Nup88Q8CEC0 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm8605-201ENSMUST00000221619 1370 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms