Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm6348-201ENSMUST00000200751 1443 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm6468-201ENSMUST00000201076 1443 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm6346-201ENSMUST00000201146 1443 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup88Q8CEC0 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC9.71□□□□□ -0.85
Nup88Q8CEC0 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nup88Q8CEC0 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Nup88Q8CEC0 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nup88Q8CEC0 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup88Q8CEC0 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Nup88Q8CEC0 Gm7328-201ENSMUST00000211123 2225 ntBASIC9.71□□□□□ -0.85
Nup88Q8CEC0 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nup88Q8CEC0 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Nup88Q8CEC0 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup88Q8CEC0 Gm43917-201ENSMUST00000191984 2360 ntBASIC9.71□□□□□ -0.85
Nup88Q8CEC0 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Nup88Q8CEC0 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Gm15516-201ENSMUST00000117292 193 ntBASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Mettl8-205ENSMUST00000121586 1151 ntTSL 5 BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Gm17983-201ENSMUST00000190766 594 ntBASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Gm6394-201ENSMUST00000197077 477 ntBASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Gm44862-201ENSMUST00000207981 1055 ntBASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Gm45346-201ENSMUST00000209925 1273 ntTSL 5 BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 AC153968.1-201ENSMUST00000215584 334 ntBASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Gm4178-201ENSMUST00000218307 649 ntBASIC9.71□□□□□ -0.86
Nup88Q8CEC0 AC124715.1-201ENSMUST00000228480 754 ntBASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Dnajc5b-201ENSMUST00000029132 923 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Gm11870-201ENSMUST00000119255 1322 ntBASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Gm37066-201ENSMUST00000192713 2061 ntBASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Cep19-201ENSMUST00000042869 1567 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup88Q8CEC0 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gm44873-201ENSMUST00000208490 3428 ntBASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gm38130-201ENSMUST00000194311 1761 ntBASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Efcab3-201ENSMUST00000021029 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Zfp180-202ENSMUST00000203854 3845 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 AC122346.1-202ENSMUST00000225586 2116 ntBASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Mir5623-201ENSMUST00000176631 70 ntBASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gm6723-201ENSMUST00000180449 441 ntBASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gm45238-201ENSMUST00000210204 517 ntTSL 2 BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gm8616-201ENSMUST00000222175 1037 ntBASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Spats1-201ENSMUST00000024731 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Olfr1402-201ENSMUST00000060912 963 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Defa29-201ENSMUST00000098890 508 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 2310005A03Rik-201ENSMUST00000142569 1398 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gimd1-204ENSMUST00000212804 1462 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Ms4a4d-201ENSMUST00000025581 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 AC132467.1-201ENSMUST00000226498 1845 ntBASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Lrrc28-201ENSMUST00000032775 1817 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Gm12408-206ENSMUST00000211577 1983 ntTSL 5 BASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC9.7□□□□□ -0.86
Nup88Q8CEC0 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms