Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AL645704.1-201ENSMUST00000221642 604 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 AC163041.2-201ENSMUST00000223082 573 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Cenpx-202ENSMUST00000055424 606 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm43942-201ENSMUST00000204522 2859 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm11239-201ENSMUST00000171348 1322 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm11237-201ENSMUST00000178319 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm11236-201ENSMUST00000180092 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm428-201ENSMUST00000084475 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm11238-201ENSMUST00000084479 1323 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Dgkh-206ENSMUST00000228362 3308 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm37266-201ENSMUST00000193802 2287 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Usp7-208ENSMUST00000161046 4003 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm38195-201ENSMUST00000194247 1499 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm43420-201ENSMUST00000198012 1857 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm45629-201ENSMUST00000209629 2546 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm12883-201ENSMUST00000117867 364 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm14425-201ENSMUST00000121240 606 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Scamp1-204ENSMUST00000153558 1255 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm4287-201ENSMUST00000174329 585 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm7132-201ENSMUST00000182302 984 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Mir6940-201ENSMUST00000183447 70 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm38164-201ENSMUST00000192810 330 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm7430-201ENSMUST00000193824 1144 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm42903-201ENSMUST00000202607 481 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Rps3-205ENSMUST00000208532 489 ntTSL 5 BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 1700012B07Rik-201ENSMUST00000020941 919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm17910-201ENSMUST00000211038 838 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm7546-202ENSMUST00000211354 275 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 AC123738.1-201ENSMUST00000224796 773 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 AC107663.2-201ENSMUST00000225534 1234 ntBASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Ctnna3-203ENSMUST00000105441 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Dbt-201ENSMUST00000000349 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Cldn12-203ENSMUST00000115446 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nup88Q8CEC0 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm37367-201ENSMUST00000191771 2602 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm13081-201ENSMUST00000121527 5599 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Zfp637-204ENSMUST00000112861 1202 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm4919-201ENSMUST00000117825 604 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm12206-201ENSMUST00000119795 601 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm3275-201ENSMUST00000169145 487 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Mir6919-201ENSMUST00000185146 62 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm23604-202ENSMUST00000198428 137 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 AC160635.1-201ENSMUST00000216731 474 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm5654-201ENSMUST00000217787 475 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Zfp637-211ENSMUST00000223041 1128 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 AC129975.2-201ENSMUST00000223705 775 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Gm21957-201ENSMUST00000073056 438 ntBASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nup88Q8CEC0 Lipc-204ENSMUST00000216798 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms