Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn13Q9Z0S4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Gm42778-201ENSMUST00000199644 553 ntBASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn13Q9Z0S4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cldn13Q9Z0S4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Gm10033-202ENSMUST00000211874 928 ntBASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn13Q9Z0S4 Reep4-203ENSMUST00000226563 1444 ntBASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
Cldn13Q9Z0S4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 Gm42569-201ENSMUST00000200539 472 ntBASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 Gm18671-201ENSMUST00000214826 683 ntBASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn13Q9Z0S4 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.68■□□□□ 0.26
Cldn13Q9Z0S4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cldn13Q9Z0S4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn13Q9Z0S4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cldn13Q9Z0S4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms