Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Gm12821-201ENSMUST00000120022 600 ntBASIC18.35■□□□□ 0.53
Cdh17Q9R100 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh17Q9R100 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdh17Q9R100 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.34■□□□□ 0.53
Cdh17Q9R100 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cdh17Q9R100 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh17Q9R100 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh17Q9R100 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Cdh17Q9R100 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.33■□□□□ 0.53
Cdh17Q9R100 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.33■□□□□ 0.53
Cdh17Q9R100 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh17Q9R100 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.33■□□□□ 0.53
Cdh17Q9R100 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh17Q9R100 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.33■□□□□ 0.52
Cdh17Q9R100 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh17Q9R100 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh17Q9R100 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh17Q9R100 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.33■□□□□ 0.52
Cdh17Q9R100 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh17Q9R100 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh17Q9R100 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cdh17Q9R100 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdh17Q9R100 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh17Q9R100 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh17Q9R100 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh17Q9R100 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.32■□□□□ 0.52
Cdh17Q9R100 Gm6139-201ENSMUST00000079261 882 ntBASIC18.32■□□□□ 0.52
Cdh17Q9R100 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cdh17Q9R100 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh17Q9R100 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh17Q9R100 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Cdh17Q9R100 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.32■□□□□ 0.52
Cdh17Q9R100 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.31■□□□□ 0.52
Cdh17Q9R100 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.31■□□□□ 0.52
Cdh17Q9R100 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh17Q9R100 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.3■□□□□ 0.52
Cdh17Q9R100 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh17Q9R100 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh17Q9R100 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh17Q9R100 Gm40848-201ENSMUST00000221998 324 ntBASIC18.29■□□□□ 0.52
Cdh17Q9R100 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.29■□□□□ 0.52
Cdh17Q9R100 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Cdh17Q9R100 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh17Q9R100 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh17Q9R100 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms