Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Crlf1Q9JM58 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Crlf1Q9JM58 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.14■□□□□ 0.01
Crlf1Q9JM58 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Gm10517-202ENSMUST00000192970 758 ntBASIC15.13■□□□□ 0.01
Crlf1Q9JM58 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Crlf1Q9JM58 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.12■□□□□ 0.01
Crlf1Q9JM58 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.12■□□□□ 0.01
Crlf1Q9JM58 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Crlf1Q9JM58 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Gm21814-202ENSMUST00000203277 873 ntBASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Crlf1Q9JM58 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf1Q9JM58 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Crlf1Q9JM58 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Crlf1Q9JM58 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.08■□□□□ 0
Crlf1Q9JM58 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf1Q9JM58 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf1Q9JM58 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf1Q9JM58 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf1Q9JM58 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf1Q9JM58 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.08■□□□□ 0
Crlf1Q9JM58 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms