Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rbfox1Q9JJ43 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Gm11421-201ENSMUST00000122124 294 ntBASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Gm27801-201ENSMUST00000184174 223 ntBASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Gm13241-201ENSMUST00000094493 780 ntBASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rbfox1Q9JJ43 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Gm12251-201ENSMUST00000117893 792 ntBASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Smad6-203ENSMUST00000179458 273 ntBASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rbfox1Q9JJ43 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Rbfox1Q9JJ43 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.96■□□□□ 0.14
Rbfox1Q9JJ43 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Rbfox1Q9JJ43 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rbfox1Q9JJ43 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Grk6-206ENSMUST00000224995 2971 ntBASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Gm7860-201ENSMUST00000121190 879 ntBASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rbfox1Q9JJ43 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms