Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr9Q9EQU3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.68■□□□□ 0.74
Tlr9Q9EQU3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr9Q9EQU3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr9Q9EQU3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.68■□□□□ 0.74
Tlr9Q9EQU3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr9Q9EQU3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr9Q9EQU3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr9Q9EQU3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Tlr9Q9EQU3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr9Q9EQU3 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.67■□□□□ 0.74
Tlr9Q9EQU3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Tlr9Q9EQU3 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.67■□□□□ 0.74
Tlr9Q9EQU3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr9Q9EQU3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr9Q9EQU3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr9Q9EQU3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr9Q9EQU3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr9Q9EQU3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.66■□□□□ 0.74
Tlr9Q9EQU3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr9Q9EQU3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr9Q9EQU3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr9Q9EQU3 Gm10849-201ENSMUST00000100397 618 ntBASIC19.66■□□□□ 0.74
Tlr9Q9EQU3 Gm27011-201ENSMUST00000182352 972 ntBASIC19.66■□□□□ 0.74
Tlr9Q9EQU3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr9Q9EQU3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr9Q9EQU3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr9Q9EQU3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr9Q9EQU3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tlr9Q9EQU3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr9Q9EQU3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr9Q9EQU3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr9Q9EQU3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr9Q9EQU3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr9Q9EQU3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.62■□□□□ 0.73
Tlr9Q9EQU3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr9Q9EQU3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.62■□□□□ 0.73
Tlr9Q9EQU3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr9Q9EQU3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr9Q9EQU3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr9Q9EQU3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr9Q9EQU3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr9Q9EQU3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tlr9Q9EQU3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.61■□□□□ 0.73
Tlr9Q9EQU3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.61■□□□□ 0.73
Tlr9Q9EQU3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tlr9Q9EQU3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tlr9Q9EQU3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms