Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssu72Q9CY97 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssu72Q9CY97 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssu72Q9CY97 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssu72Q9CY97 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ssu72Q9CY97 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssu72Q9CY97 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssu72Q9CY97 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssu72Q9CY97 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssu72Q9CY97 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssu72Q9CY97 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssu72Q9CY97 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.69■□□□□ 0.58
Ssu72Q9CY97 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ssu72Q9CY97 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssu72Q9CY97 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssu72Q9CY97 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.68■□□□□ 0.58
Ssu72Q9CY97 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ssu72Q9CY97 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssu72Q9CY97 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.68■□□□□ 0.58
Ssu72Q9CY97 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ssu72Q9CY97 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Gm5812-201ENSMUST00000061073 957 ntBASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssu72Q9CY97 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Ssu72Q9CY97 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssu72Q9CY97 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ssu72Q9CY97 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssu72Q9CY97 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ssu72Q9CY97 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.66■□□□□ 0.58
Ssu72Q9CY97 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssu72Q9CY97 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ssu72Q9CY97 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Ssu72Q9CY97 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssu72Q9CY97 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssu72Q9CY97 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ssu72Q9CY97 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Gm9959-201ENSMUST00000068277 390 ntBASIC18.64■□□□□ 0.57
Ssu72Q9CY97 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssu72Q9CY97 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssu72Q9CY97 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ssu72Q9CY97 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssu72Q9CY97 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssu72Q9CY97 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssu72Q9CY97 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.63■□□□□ 0.57
Ssu72Q9CY97 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ssu72Q9CY97 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssu72Q9CY97 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ssu72Q9CY97 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssu72Q9CY97 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssu72Q9CY97 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssu72Q9CY97 Gm15546-201ENSMUST00000122095 826 ntBASIC18.62■□□□□ 0.57
Ssu72Q9CY97 Golgb1-201ENSMUST00000023534 498 ntBASIC18.62■□□□□ 0.57
Ssu72Q9CY97 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssu72Q9CY97 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssu72Q9CY97 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ssu72Q9CY97 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssu72Q9CY97 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssu72Q9CY97 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssu72Q9CY97 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms