Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mrpl54Q9CPW3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mrpl54Q9CPW3 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.71■□□□□ 0.27
Mrpl54Q9CPW3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Mrpl54Q9CPW3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mrpl54Q9CPW3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mrpl54Q9CPW3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mrpl54Q9CPW3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Mrpl54Q9CPW3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mrpl54Q9CPW3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mrpl54Q9CPW3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mrpl54Q9CPW3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Mrpl54Q9CPW3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.7■□□□□ 0.26
Mrpl54Q9CPW3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Gm8969-201ENSMUST00000199694 526 ntBASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Mrpl54Q9CPW3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl54Q9CPW3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl54Q9CPW3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl54Q9CPW3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
Mrpl54Q9CPW3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl54Q9CPW3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl54Q9CPW3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl54Q9CPW3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.68■□□□□ 0.26
Mrpl54Q9CPW3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms