Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm45640-201ENSMUST00000210665 1896 ntBASIC23.28■■□□□ 1.32
Trim34aQ99PP6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34aQ99PP6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34aQ99PP6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Gm21596-201ENSMUST00000178049 1316 ntBASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34aQ99PP6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34aQ99PP6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Gm5540-201ENSMUST00000131852 1848 ntBASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Gm11249-201ENSMUST00000117071 859 ntBASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC23.25■■□□□ 1.31
Trim34aQ99PP6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34aQ99PP6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Gm18666-201ENSMUST00000190039 958 ntBASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Arhgef33-211ENSMUST00000225658 473 ntBASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.24■■□□□ 1.31
Trim34aQ99PP6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Gm6576-201ENSMUST00000169678 883 ntBASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34aQ99PP6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim34aQ99PP6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim34aQ99PP6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC23.22■■□□□ 1.31
Trim34aQ99PP6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.22■■□□□ 1.31
Trim34aQ99PP6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC23.22■■□□□ 1.31
Trim34aQ99PP6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Trim34aQ99PP6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Trim34aQ99PP6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Trim34aQ99PP6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Gm2399-201ENSMUST00000104944 225 ntBASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Gm29241-201ENSMUST00000189260 1096 ntBASIC23.21■■□□□ 1.31
Trim34aQ99PP6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34aQ99PP6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Trim34aQ99PP6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms