Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Gm10602-201ENSMUST00000098239 609 ntBASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf2ird2Q99NI3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf2ird2Q99NI3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf2ird2Q99NI3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf2ird2Q99NI3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf2ird2Q99NI3 Nespas-201ENSMUST00000143738 1083 ntBASIC19.29■□□□□ 0.68
Gtf2ird2Q99NI3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf2ird2Q99NI3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf2ird2Q99NI3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf2ird2Q99NI3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf2ird2Q99NI3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf2ird2Q99NI3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Gm7290-201ENSMUST00000104990 617 ntBASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Gm12918-201ENSMUST00000120234 636 ntBASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Gm15710-201ENSMUST00000121821 636 ntBASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Gm5075-201ENSMUST00000196916 622 ntBASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf2ird2Q99NI3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf2ird2Q99NI3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf2ird2Q99NI3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf2ird2Q99NI3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.27■□□□□ 0.68
Gtf2ird2Q99NI3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.27■□□□□ 0.68
Gtf2ird2Q99NI3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.27■□□□□ 0.68
Gtf2ird2Q99NI3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf2ird2Q99NI3 Mir5133-201ENSMUST00000174955 77 ntBASIC19.27■□□□□ 0.68
Gtf2ird2Q99NI3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf2ird2Q99NI3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Gtf2ird2Q99NI3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf2ird2Q99NI3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf2ird2Q99NI3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf2ird2Q99NI3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf2ird2Q99NI3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf2ird2Q99NI3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf2ird2Q99NI3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf2ird2Q99NI3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Gtf2ird2Q99NI3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Gtf2ird2Q99NI3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms