Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Trem2Q99NH8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trem2Q99NH8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.22■□□□□ 0.67
Trem2Q99NH8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trem2Q99NH8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trem2Q99NH8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trem2Q99NH8 Gm13146-201ENSMUST00000118508 780 ntBASIC19.21■□□□□ 0.67
Trem2Q99NH8 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.21■□□□□ 0.67
Trem2Q99NH8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trem2Q99NH8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trem2Q99NH8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trem2Q99NH8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trem2Q99NH8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trem2Q99NH8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trem2Q99NH8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trem2Q99NH8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trem2Q99NH8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Trem2Q99NH8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trem2Q99NH8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trem2Q99NH8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trem2Q99NH8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trem2Q99NH8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trem2Q99NH8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trem2Q99NH8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trem2Q99NH8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trem2Q99NH8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trem2Q99NH8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Trem2Q99NH8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trem2Q99NH8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.19■□□□□ 0.66
Trem2Q99NH8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trem2Q99NH8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trem2Q99NH8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trem2Q99NH8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trem2Q99NH8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trem2Q99NH8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trem2Q99NH8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trem2Q99NH8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.18■□□□□ 0.66
Trem2Q99NH8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trem2Q99NH8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trem2Q99NH8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trem2Q99NH8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trem2Q99NH8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trem2Q99NH8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trem2Q99NH8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trem2Q99NH8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trem2Q99NH8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trem2Q99NH8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trem2Q99NH8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trem2Q99NH8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trem2Q99NH8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trem2Q99NH8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trem2Q99NH8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.15■□□□□ 0.66
Trem2Q99NH8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trem2Q99NH8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Trem2Q99NH8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trem2Q99NH8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
Trem2Q99NH8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trem2Q99NH8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Trem2Q99NH8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trem2Q99NH8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Trem2Q99NH8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trem2Q99NH8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trem2Q99NH8 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.15■□□□□ 0.66
Trem2Q99NH8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trem2Q99NH8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.15■□□□□ 0.66
Trem2Q99NH8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trem2Q99NH8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trem2Q99NH8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trem2Q99NH8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.14■□□□□ 0.65
Trem2Q99NH8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Trem2Q99NH8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.14■□□□□ 0.65
Trem2Q99NH8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trem2Q99NH8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trem2Q99NH8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms