Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha1Q91Y21 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha1Q91Y21 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha1Q91Y21 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha1Q91Y21 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha1Q91Y21 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha1Q91Y21 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha1Q91Y21 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha1Q91Y21 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha1Q91Y21 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha1Q91Y21 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha1Q91Y21 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Gm6211-202ENSMUST00000167849 925 ntBASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha1Q91Y21 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha1Q91Y21 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha1Q91Y21 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Pcdha1Q91Y21 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha1Q91Y21 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha1Q91Y21 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha1Q91Y21 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha1Q91Y21 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha1Q91Y21 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha1Q91Y21 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha1Q91Y21 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha1Q91Y21 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha1Q91Y21 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Pcdha1Q91Y21 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha1Q91Y21 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha1Q91Y21 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha1Q91Y21 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha1Q91Y21 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Pcdha1Q91Y21 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Pcdha1Q91Y21 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha1Q91Y21 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.57■□□□□ 0.72
Pcdha1Q91Y21 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha1Q91Y21 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha1Q91Y21 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha1Q91Y21 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.56■□□□□ 0.72
Pcdha1Q91Y21 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdha1Q91Y21 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha1Q91Y21 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha1Q91Y21 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdha1Q91Y21 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha1Q91Y21 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha1Q91Y21 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha1Q91Y21 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdha1Q91Y21 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms