Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Gm27801-201ENSMUST00000184174 223 ntBASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Gm40848-201ENSMUST00000221998 324 ntBASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga3Q91XY5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Rarb-207ENSMUST00000225921 2756 ntBASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhga3Q91XY5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Gm43060-201ENSMUST00000200621 289 ntBASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga3Q91XY5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga3Q91XY5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga3Q91XY5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhga3Q91XY5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhga3Q91XY5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhga3Q91XY5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhga3Q91XY5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhga3Q91XY5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhga3Q91XY5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga3Q91XY5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga3Q91XY5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga3Q91XY5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga3Q91XY5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhga3Q91XY5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga3Q91XY5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga3Q91XY5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga3Q91XY5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhga3Q91XY5 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.63■□□□□ 0.25
Pcdhga3Q91XY5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga3Q91XY5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms